Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLLPKRVKYRREHRGKMRGRAKGGTEVHFGEFGIQALEASWITNRQIEAARIAMTRYMKRGGKVWIKIFPSKPYTAKPLEVRMGSGKGAPEGWVAVVKPGKVLFEISGVSEEVAREALRLASHKLPIKTKFVKREEIGGESNES
4WFA Chain:J ((4-141))
---PKRVKYRRQHRPKTTGRSKGGNYVTFGEFGLQATTTSWITSRQIESARIAMTRYMKRGGKVWIKIFPHTPYTKKPLEVRMGAGKGAVEGWIAVVKPGRILFEVAGVSEEVAREALRLASHKLPVKTKFVKREELGGET---
General information:
TITO was launched using:
RESULT:
Template:
4WFA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34286 for 966 contacts (-35.5/contact) +
2D Compatibility (PS) -15110 + (NN) -6323 + (LL) 556
1D Compatibility (HY) -14800 + (ID) 5550
Total energy: -75513.0 ( -78.17 by residue)
QMean score : 0.513
(partial model without unconserved sides chains):
PDB file :
Tito_4WFA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WFA-query.scw
PDB file :
Tito_Scwrl_4WFA.pdb
: