Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSERNQRKVYQGRVVSDKMDKTITVVVETYKKHTLYGKRVKYSKKFKAHDENNQAKIGDIVKIMETRPLSATKRFRLVEVVEEAVII
1RIP Chain:A ((5-84))-----QRKVYVGRVVSDKMDKTITVLVETYKKHPLYGKRVKYSKKYKAHDEHNEAKVGDIVKIMETRPLSATKRFRLVEIVEKAV--


General information:
TITO was launched using:
RESULT:

Template: 1RIP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8598 for 519 contacts (-16.6/contact) +
2D Compatibility (PS) -8211 + (NN) 1863 + (LL) 712
1D Compatibility (HY) -10800 + (ID) 3550
Total energy: -28584.0 ( -55.08 by residue)
QMean score : 0.361

(partial model without unconserved sides chains):
PDB file : Tito_1RIP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1RIP-query.scw
PDB file : Tito_Scwrl_1RIP.pdb: