Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITKTSKNAARLKRHARVRAKLSGTAERPRLNVFRSNKHIYAQIIDDVNGVTLASASTLDKDLNVESTGDTSAATKVGELVAKRAAEKGISDVVFDRGGYLYHGRVKALADAAREAGLKF
4WCE Chain:L ((1-110))
MISKIDKNKVRLKRHARVRTNLSGTAEKPRLNVYRSNKHIYAQIIDDNKGVTLAQASSKDSDIATTAT-KVELATKVGEAIAKKAADKGIKEIVFDRGGYLYHGRVKALAE---------
General information:
TITO was launched using:
RESULT:
Template:
4WCE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6036 for 758 contacts (-8.0/contact) +
2D Compatibility (PS) -11570 + (NN) -2470 + (LL) 664
1D Compatibility (HY) -8800 + (ID) 3900
Total energy: -32112.0 ( -42.36 by residue)
QMean score : 0.302
(partial model without unconserved sides chains):
PDB file :
Tito_4WCE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WCE-query.scw
PDB file :
Tito_Scwrl_4WCE.pdb
: