Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLHELKPSEGSRKTRNRVGRGIGSGNGKTAGKGHKGQNARSGGGVRPGFEGGQMPLFQRLPKRGFTNINRKEYAVVNLDKLNGFAEGTEVTPELLLETGVISKLNAGVKILGNGKLEKKLTVKANKFSASAKEAVEAAGGTAEVI
4WCE Chain:I ((1-131))
MKLHELKPAEGSRKERNRVGRGVATGNGKTSGRGHKGQKARSGGGVRPGFEGGQLPLFRRLPKRGFTNINRKEYAIVNLDQLNKFEDGTEVTPALLVESGVVKNEKSGIKILGNGSLDKKLTVKAHKFSAS---------------
General information:
TITO was launched using:
RESULT:
Template:
4WCE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 28414 for 664 contacts (42.8/contact) +
2D Compatibility (PS) -14005 + (NN) -4813 + (LL) 1392
1D Compatibility (HY) -12400 + (ID) 5150
Total energy: -6562.0 ( -9.88 by residue)
QMean score : 0.115
(partial model without unconserved sides chains):
PDB file :
Tito_4WCE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WCE-query.scw
PDB file :
Tito_Scwrl_4WCE.pdb
: