Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGVKKEKGRKRFRKRKTFGNQILPLELLIEKNKREIINSAELMEEIYMKIDEKHTQCVTK
2KW3 Chain:C ((227-249))
------------------------LEQVLNQKRLSLLRSPEVVQFLQ-------------
General information:
TITO was launched using:
RESULT:
Template:
2KW3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1715 for 107 contacts (-16.0/contact) +
2D Compatibility (PS) -2152 + (NN) 1602 + (LL) 2516
1D Compatibility (HY) -2400 + (ID) 200
Total energy: -2349.0 ( -21.95 by residue)
QMean score : 0.228
(partial model without unconserved sides chains):
PDB file :
Tito_2KW3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KW3-query.scw
PDB file :
Tito_Scwrl_2KW3.pdb
: