Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNHFYVWHIKRVKQLIIILIAAFAAASFFYIQRAVPLPVFSTDTGPKAIYKGETDSKDISLTFDISWGDERAEPILNTLKANGIKNATFFLSASWAERHPDTVARIVKDGHQIGSMGYAYKNYANLESSEIKKDMNRAQTAFEKL-GVKDIQLLRPPTGQFNKNVLKVAKQYNYTVVHYSVNSQDW---TNPGVEKIIDNVTKQVSGGDIILLHASDSAKQTEEALPDIIHQLKEKGLKNVTVGDLIANSDAKSAEVK |
| 1W17 Chain:A ((57-259)) | -----------------------------------------------AFYLGNTKEKTIYLTFDNGYENGYTPKVLDVLKKHRV-TGTFFVTGHFVKDQPQLIKRMSDEGHIIGNHSFHHPDLTTKTADQIQDELDSVNEEVYKITGKQDNLYLRPPRGVFSEYVLKETKRLGYQTVFWSVAFVDWKINNQKGKKYAYDHMIKQAHPGAIYLLHT--VSRDNAEALDDAITDLKKQGYTFKSIDDLMFEKEMR----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W17.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 27195 for 1829 contacts (14.9/contact) +
2D Compatibility (PS) -21923 + (NN) -14500 + (LL) 5048
1D Compatibility (HY) -13200 + (ID) 3050
Total energy: -20430.0 ( -11.17 by residue)
QMean score : 0.603
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