Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIYGIYMDRPLSQEETDRLMSFVSAEKREKCRRFYHKEDAHRTLLGDVLVRSVISEQYQLNKADIRFSAQEYGKPCIPD-----LPNAHFNISHSGHWVIGAFDSD-PIGVDIEKMK-------PISLGIAERFFSKNEYSDLLSKHKDE--QNDYFYHLWSMKESFIKQEGKGLSLPLDSFSVRLHEDGRVSVELPEHHTPCFIKTYEVDPGYKMAVCAARPDFPEDITMISYEALL |
| 2BYD Chain:A ((50-230)) | -----------------------IQPEEKERIGQFVFARDAKAAMAGRLMIRKLVAEKLNIPWNHIRLQRTAKGKPVLAKDSSNPYPNFNFNISHQGDYAVLAAEPELQVGIDIMKTSFPGRGSIPEFFHIMKRKFTNKEWETIRS-FKDEWTQLDMFYRNWALKESFIKAIGVGLGFELQRLEFDL---------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2BYD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -40756 for 945 contacts (-43.1/contact) +
2D Compatibility (PS) -15575 + (NN) -5154 + (LL) 5276
1D Compatibility (HY) -13200 + (ID) 2550
Total energy: -71959.0 ( -76.15 by residue)
QMean score : 0.380
|
|
|