Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MILVSSCLGGIECRYNGSHAASEKIRKLVDEKKAVMACPELLGGFSTPREPAEIIGGTGEDVLNGTAKIVTASGEDVTELYMEGAAKTLAYAKEINASAVILKENSPSCGSGFIYNGTFSGKKITGSGVTAALLKQAGYRVISENELNDIL
4J38 Chain:A ((70-133))
-----------------------------------------------------------EEVVNNFVKVMTEGGSFKTSLYY-GYKEEQSVINGIQNKEIITKIEKID-GTEYI---TFSGDKIKNSG-----------------------
General information:
TITO was launched using:
RESULT:
Template:
4J38.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2241 for 358 contacts (-6.3/contact) +
2D Compatibility (PS) -6423 + (NN) 1436 + (LL) 5368
1D Compatibility (HY) -4800 + (ID) 1150
Total energy: -7810.0 ( -21.82 by residue)
QMean score : 0.025
(partial model without unconserved sides chains):
PDB file :
Tito_4J38.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4J38-query.scw
PDB file :
Tito_Scwrl_4J38.pdb
: