Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEMMIKKRIKQVKKGDQDAFADIVDIYKDKIYQLCYRMLGNVHEAEDIAQEAFIRAYVNIDSFDINRKFS-TWLYRIATNLTIDRIRKKKPDYYLDAEVAGTEGLTMYSQIVADGVLPEDAVVSLELSNTIQQKILK----LPDKYRTVIVLKYIDELSLIEIGEILNIPVGTVKTRIHRGREALRKQLRDL
4NQW Chain:A ((32-196))--------LRRVA-HDQAAFAEFYDHTKSRVYGLVMRVLRDTGYSEETTQEIYLEVWRNASEFDSAKGSALAWLLTMAHRRAVDRVR---------CE-----------------------------AGDERRRVTECLKALTDTQRQCIELAYYGGLTYVEVSRRLAANLSTIKSRM---RDALRS-----


General information:
TITO was launched using:
RESULT:

Template: 4NQW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66650 for 853 contacts (-78.1/contact) +
2D Compatibility (PS) -13942 + (NN) -3800 + (LL) 4224
1D Compatibility (HY) -9200 + (ID) 2050
Total energy: -91418.0 ( -107.17 by residue)
QMean score : 0.494

(partial model without unconserved sides chains):
PDB file : Tito_4NQW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NQW-query.scw
PDB file : Tito_Scwrl_4NQW.pdb: