Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTWHEVNDVIVITLPEIFDMNANLGYLTREKNECMYEIENNIITKVIAIGEIRSLVQVSVINNKQMIVQFLNDSRPVEQWKREEIVKYIHEWFDLDNDLT----PFYEMAKADPLLKMPARKFYGLRVIGIPDLFEALCWGVLGQQINLAFAYSLKKQFVEAFGDSIEWNGKKYWVFPPYERIARLTPTDLADIKMTVKKSEYIIGIARLMASGELSREKLMKMNFKDAEKNLIKIRGIGPWTANYVLMRCLRFPTAFPIDDVGLIHSIKILRNMNRKPTKDEILEISVPWKEWQSYATFYLWRVLY |
| 3OGD Chain:A ((17-279)) | -----------------YDWSWMLGFLAARAVSSVETVADSYYARSLAVGEYRGVV--TAIPDIARHTLHINLSAGLEPVAAECLAK-MSRLFDLQCNPQIVNGALGRLGAARP----------GLRLPGCVDAFEQGVRAILGQCVSVAMAAKLTARVAQLYGERLD-DFPEYICFPTPQRLAAADPQALKALGMPLKRAEALIHLANAALEGTLP--MTIPGDVEQAMKTLQTFPGIGRWTANYFALRGWQAKDVFLPDDY-------LIKQRFPGMTPAQIRRYAERWKPWRSYALLHIW---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OGD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137768 for 2028 contacts (-67.9/contact) +
2D Compatibility (PS) -27321 + (NN) -11995 + (LL) 4620
1D Compatibility (HY) -16400 + (ID) 3600
Total energy: -192464.0 ( -94.90 by residue)
QMean score : 0.334
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