Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTNLNEKQLITEIVGLARSQGLTVHSENAQLNETGMDFQVVFAKDDTGMPWVLRKPRRSDVVERASAEGITLAFLRANLTADVPDWRIHTPELIAYPMLKGTPAAGIDLEQKQYVWNMDHQPPSDDFVRTLADILAELHGTDQISAGQSGIEVIRPEDFRQMTADSMVDVKNKLGVSTTLWERWQKWVDD--------DAYWPGFSSLIHGDLHPPHILID-QNGRVTGLLDWTEAKVADPAKDFV---LYQTIFGEKETARLLEYYDQAGGRIWAKMQEHISEMQAAYPVEIAKLALQTQQEEHINMALEALGVTSD
4DBX Chain:A ((121-252))--------------------------------------------------------------------------------------------------------------------------------KDLARFLSELHSIN-ISGFKSNLVL----DFREKINEDNKKIKKLL--SRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHY---------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4DBX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 322 -47104 -146.29 -392.53
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -146.29
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.359

(partial model without unconserved sides chains):
PDB file : Tito_4DBX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DBX-query.scw
PDB file : Tito_Scwrl_4DBX.pdb: