Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKGAAFVKKEGLKQKALEIGRVPTHLKLEIEDYGGDDKRAHFCWADPQDENTGIIVELGPDGELESLSRDIEPESGERLSEEKLEDIMRQFVETHHPGALSAFVREENDRAYGDKVRFSYVQMEAGLPLPMSGFMADVS-LSGEIVYFRYYGEAGSIIKP---KRVADVEEALAFIKKDVEFDLLFEVLHRSVYKNGDDQPHLVYEPEGRAITVPADLVQEEQAVDDDDDYREPESFPLPLFEGIREKADPDSMIGIENGFVKEREADLGDGRIGIVWRNPDDPVYQPADKSMDSWFKGRTHQVLKTIYNKETGKLEGVMSFMEKKGPLTVTLAECEKIALRFLFALFPNADQYFRIRYDEKDEEENAVAGFTFEAHCHGVPLRFGQIRICVSRQTGYITVYMGPDIDPNKLATIDPVPAISVEQAKSIFWQHFKVELGWEREYGDDEEHSYRLVYKPVYPHFIDAHTGEPVFSIW
4EQ5 Chain:A ((151-274))---------------------------------------------------------------LANLFMDASPDEGKYLARTVL-GIMRT-------GVAEGLLRDALADAF--KVRVELVE-RAYMLTSDFGFVAKVAKLEGDEGLAKVKIQVGKPIKPMLAQMAANVREALVEMGGEAEFEIKYDGARVQVHKNGN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4EQ5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 272 -30295 -111.38 -252.45
target 2D structure prediction score : 0.35
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -111.38
2D Compatibility (Sec. Struct. Predict.) : 0.35
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.141

(partial model without unconserved sides chains):
PDB file : Tito_4EQ5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4EQ5-query.scw
PDB file : Tito_Scwrl_4EQ5.pdb: