Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFTCKVNEHITIRLLEPKDAERLAELIIQNQQRLGK---WLFFAENPSSADTYRETIIPDWRRQYADLNGIEAGLLYDGSLCGMISLHNLDQVNRKAEIGYWIAKEFEGKGIITAACRKLITYAFEELELNRVAICAAVGNEKSRAVPERIGFLEEGKARDGLYVNGMHHDLVYYSLLKREWEGEK
3R9E Chain:A ((17-184))----KVNDEITLLYPALKYAEELYLLINQNKINFIKSMAWPAFVNNISDSVSFIEQSMIDNQNEKALILFIK----YKTKIAGVVSFNIIDHANKTAYIGYWLGANFQGKGIVTNAINKLIQEYGDSGVIKRFVIKCIVDNKKSNATALRCGFTLEGVLQKAEILNGVSYDQNIYS----------


General information:
TITO was launched using:
RESULT:

Template: 3R9E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 700 -97756 -139.65 -592.46
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -139.65
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.437

(partial model without unconserved sides chains):
PDB file : Tito_3R9E.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3R9E-query.scw
PDB file : Tito_Scwrl_3R9E.pdb: