Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMISIMMKVSLAVFMLAGGIIKVSRVPFQVEHWRHYQYPLWFLTVTGILEIAGALAMTAGIWNRYAAIGAGVLFVVLMAGAIHAHMFRARQSVIMAIQAMICLIVSIMIIMGSYT
4C48 Chain:C ((15-38))-VPVVMAIILGLIYGLGEVFNIFSG-----------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4C48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 4 -1097 -274.25 -45.71
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain C : 0.44

3D Compatibility (PKB) : -274.25
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.44
QMean score : 0.114

(partial model without unconserved sides chains):
PDB file : Tito_4C48.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4C48-query.scw
PDB file : Tito_Scwrl_4C48.pdb: