Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKFAVFASGNGSNFEAIVTRLKEENWDASAALLVCDKPQAKVIERAEAFHIPSFAFEPKSYENKAAFEQAIIEQLRLHEVELIALAGYMRLIGDTLLQAYGGKIINIHPSLLPAFPGIDAVGQAFRAGVKVAGITVHYVDEGMDTGPIIAQKAIEIDEHDTLETIEQRIHKLEHKWYPSVIKQLLGLNNRGEKA
4S1N Chain:A ((5-182))-KKIAVFASGNGSNFQVIAEEFPVE-------FVFSDHRDAYVLERAKQLGVLSYAFELKEFESKADYEAALVELLEEHQIDLVCLAGYMKIVGPTLLSAYEGRIVNIHPAYLPEFPGAHGIEDAWNAGVGQSGVTIHWVDSGVDTGQVIKQVRVPRLADDTIDRFEARIHEAEYRLYPEVVKALF---------


General information:
TITO was launched using:
RESULT:

Template: 4S1N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 877 -136819 -156.01 -768.65
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.84

3D Compatibility (PKB) : -156.01
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.621

(partial model without unconserved sides chains):
PDB file : Tito_4S1N.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4S1N-query.scw
PDB file : Tito_Scwrl_4S1N.pdb: