Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEGYLVLEDGTSFSGELDGHE-NCTGEAVFFTGMTGYQEVLTDPSYKGQIIVFTYPLIGNYGINEKDFESKKPQVKAAVVYEACDHFSHYEAVYSLKEYLQKWNIPLLTHVDTRAVVKKIRANGTM-GATVTASKEGAEIALQPE---------NVAEQASAQEISTFGDGNK-----------------HIALIDFGYKKSIASSLVKRGCKVTVVPYQ-QMEAVYNIKPDGIVLSNGPGDPKAIQPYLGKIKSII-SRFPTLGICLGHQLIALAFGGNTFKLPFGHRGANHPVIDRKTKRVFMTSQNHSYVVDEQSINEEELTIRFHHVNDTSVEGLAHKKLPVMSVQFHPEAHPGPAESEWIFDDYLKNVIPARREIAHA
1CE8 Chain:B ((7-379))----LVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPQAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATL-PANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRK-----


General information:
TITO was launched using:
RESULT:

Template: 1CE8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2234 -169388 -75.82 -493.84
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain B : 0.80

3D Compatibility (PKB) : -75.82
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.484

(partial model without unconserved sides chains):
PDB file : Tito_1CE8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1CE8-query.scw
PDB file : Tito_Scwrl_1CE8.pdb: