Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTTRKPFIICDFDGTITMNDNIINIMKTFAPPEWMA-LKDGVLSKTLSIKEGVGRMFGLLPSSLKEEITSFVLEDA-KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGI-VEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQY--IIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPY--QDFYEIRKEIENVKEVQEWLQNKNAGESSLK
1L8L Chain:A ((20-224))----------DVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQPS-REQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKF---YFNGEYAGFDETQPTAESGG-KGKVIKFLKEKFHFKKIIMIGDGATDMEACPPADAFIG--FGGNVIRQQVKDNAKWYITDFVELLGELE--------------------


General information:
TITO was launched using:
RESULT:

Template: 1L8L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 923 -105025 -113.79 -530.43
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -113.79
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.321

(partial model without unconserved sides chains):
PDB file : Tito_1L8L.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1L8L-query.scw
PDB file : Tito_Scwrl_1L8L.pdb: