Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVCQHNDELEALVKKAKKVTDKGEVASYIPALAKADKHDLSVAIYYSNNVCLSAGDVEKTFTLQSISKVLSLALVLMEYGKDKVFSYVGQEPTGDPFNSIIKLETVNPSKPLNPMINAGALVVTSLIRGRTVKERLDYLLSFIRRLTNNQEITYCREVAESEYSTSMINRAMCYYMKQYGIFEDDVEAVMDLYTKQCAIEMNSLDLAKIGSVFALNGRHPETGEQVISKDVARICKTFMVTCGMYNASGEFAIKVGIPAKSGVSGGIMGISPYDF-------GIGIFGPALDEKGNSIAGVKLLEIMSEMYRLSIF
2OSU Chain:A ((20-330))-------QLHDWVEYYRPFAANGQSANYIPALGKVNDSQLGICVLEPDGTMIHAGDWNVSFTMQSISKVISFIAACMSRGIPYVLDRVDVE----------------PGKPFNPMINAGALTIASILPGESAYEKLEFLYSVMETLIGKRPRIH-EEVFRSEWETAHRNRALAYYLKETNFLEAEVEETLEVYLKQCAMESTTEDIALIGLILAHDGYHPIRHEQVIPKDVAKLAKALMLTCGMYNASGKYAAFVGVPAKSGVSGGIMALVPPSAQPFQSGCGIGIYGPAIDEYGNSLTGGMLLKHMAQEWELSIF


General information:
TITO was launched using:
RESULT:

Template: 2OSU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1739 -200309 -115.19 -702.84
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : -115.19
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.551

(partial model without unconserved sides chains):
PDB file : Tito_2OSU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2OSU-query.scw
PDB file : Tito_Scwrl_2OSU.pdb: