Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPEGKIIKALSGFYYVLDESEDSDKVIQCRGRGIFRKNKITPLVGDYVVYQ---AENDKEGYLMEIKERTNELIRP--PIC-NVDQAVLVFSAVQPSFSTALLDRFLVLVEANDIQPIICITKMDLIEDQDTEDTIQAYAEDYRNIGYDVYLTSSKDQDSLADIIPHFQDKTTVFAGQSGVGKSSLLNAISPELGLR----TNEISEHLGRGKHTTRHVELIH-TSGGLVADTPGFSSLEFTDIEEEELGYTFPDIREKSSSCKFRGCLHLKEPKCAVKQAVEDGELKQYRYDHY---VEFMTEIKDRKPRY
2RCN Chain:A ((63-345))------------------ESADGE-VHRCNIRRTIR----SLVTGDRVVWRPGK----VKGIVEAVHERTSVLTRPVKPIAANIDQIVIV-SAILPELSLNIIDRYLVGCETLQVEPLIVLNKIDLLDDEGM-DFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNAL---LGLQNEILTN-------------TAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGHCKYRDCKHDADPGCAIREAVENGAIAETRFENYHRILESMA---------


General information:
TITO was launched using:
RESULT:

Template: 2RCN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1127 -171570 -152.24 -703.16
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -152.24
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.459

(partial model without unconserved sides chains):
PDB file : Tito_2RCN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2RCN-query.scw
PDB file : Tito_Scwrl_2RCN.pdb: