Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKRNGIVSALCFIGFLAAEAPDISVAEALVLLSILFFVPGIFPFVFRQSPVRAAQFMENGLIQCYPVAAFFAVLALVTEVGGFALIWWMYTVFNALYAILRLWETKIHRIEETSVLFGLIYLAGGGFWFFAYAAHLQIMQFGPLIILLTAVHFHYSAFLIPIFNGLLGRTIRKHRMLYSWITWVILLSPLLIALGITYSKTLDVIAVSIYMAAIYLHAFLVFTAAFRTKTGTFLIRLSSAVLMITIAFSMIYSFGVFRQEVTLTINQMIWIHGFVNAFGVILPALIGWRIEDAKPFDADSVKTFSRIYGKRKIGEEFLANIQAENNARYSGLVDDMGSLRSKDFSPEKLAPLILSFYEQTIEYNIKAKVTWSTWFRPLAIIYEWFSRRIGQIHLSTNPDWYRMYSKIKGVHSKKDGRERVRAWIRTNEKNETIFTALYSVYRSNGEGYMNISLPLPFSSMTGILKPYHHQEKLVLTSRRRKSRAGDEGIYLQTRAGTCPLPLSETFLIEAVHDNKLTAVHHMWLFGIKFLTVHYSITHINQPIERT
3LDL Chain:A ((108-150))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DIGGGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVP-------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3LDL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 35 -2542 -72.61 -59.10
target 2D structure prediction score : 0.40
Monomeric hydrophicity matching model chain A : 0.43

3D Compatibility (PKB) : -72.61
2D Compatibility (Sec. Struct. Predict.) : 0.40
1D Compatibility (Hydrophobicity) : 0.43
QMean score : 0.296

(partial model without unconserved sides chains):
PDB file : Tito_3LDL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3LDL-query.scw
PDB file : Tito_Scwrl_3LDL.pdb: