Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGDVNYFLTFGAGFLSFISPCCLPLYPAFLSYITGVSMDDVKTEKLLLQKRSLFHTLCFLLGFSVIFIALGYGTSFIGSLFRDYHDAIRQIGALLIILFGFITLGVFRPEAMMKERRIHFKHKPSGFLGSVLIGMAFAAGWTPCTGPILAAVITLAGTNPGSAVPYMMLYVLGFAVPFLLLSFFITKLKWIRKNQLFIMKAGGVLMIVIGVLLFFNWMSLIIILLSDLFGGFTGF
2Y69 Chain:L ((43-55))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------LFFGSGFAAPFFI-------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2Y69.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain L - contact count / total energy / energy per contact / energy per residue : 2 -504 -251.75 -38.73
target 2D structure prediction score : 0.38
Monomeric hydrophicity matching model chain L : 0.37

3D Compatibility (PKB) : -251.75
2D Compatibility (Sec. Struct. Predict.) : 0.38
1D Compatibility (Hydrophobicity) : 0.37
QMean score : 0.150

(partial model without unconserved sides chains):
PDB file : Tito_2Y69.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2Y69-query.scw
PDB file : Tito_Scwrl_2Y69.pdb: