Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIDYSQFPRKNILCVDMKSFYASVSAVTMGLNPL--TCYLAVVGNTDRQGSVVLAASPALKKDFGIKTGSRL-FEIPEDPRIHIVNPQMKLFIRVSTEITKLFYRFVPEKCVHTYSIDESFLDAGKE-----DPEEMAKAIQSSMWREFGLMCTVGIGDNMLLSKLALDLESKKTKSGIARWRYEDVPNKLWKVRPLSKMWGIGGRMERNLNRMGISTIGQLAKFPLELLEKKFGIMGNQLYYHAHGIDLSEIGAPLMQGQISFGKSQILLRDYTRSEEIKAVLLEICEEVARRARTHNKVGRTISLGIGYSKDELGGGFHRSKTIDLPTSITMDIYRCCLMLFNKFYSGKTVRSVSVTLSNIEDDVNQQLSLFEVDNEKRRKLGFVMDGIRSKYGSKAILRAVSYTPAGTALQRAGLTGGHKS
4IR9 Chain:F ((3-274))---------RKIIHVDMDCFFA---AVEMRDNPALRDIPIAIGGSRERRGVISTANYPARK--FGVRSAMPTGMALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSR--IEPLSLDEAYLDVTDSVHCHGSATLIAQEIRQTIFNELQLTASAGVAPVKFLAKIASDMNKPNGQFVIT---PAEVPAFL-QTLPLAKIPGVGKVSAAKLEAMGLRTCGDVQKCDLVMLLKRFGKFGRILWERSQGIDERDVNSERLRK--SVGVERTMAEDIHHWSECEAIIERLYPELERR----------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4IR9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 1216 4214 3.47 15.96
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain F : 0.68

3D Compatibility (PKB) : 3.47
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.426

(partial model without unconserved sides chains):
PDB file : Tito_4IR9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4IR9-query.scw
PDB file : Tito_Scwrl_4IR9.pdb: