Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEELLTIAFRTVVLYFVILVIFRFMGKREIGELSILDLVVFIMMAEIAVLAIENVDDHLFHTILPMLVLMIIQVTLAYFSLKNRKVRQLLDGKPTIIIKYGKIDEEAMKSQRYNFDDLMVQLRENSIDRVADVSFAILEPSGKLTIVKKENSGEHRQLEMPLIIDGFIQTENLSRISKDRKWLLESLQKHGYTNPSDISFCSFT-DGEIYIDEKDGHRT
2JUG Chain:A ((4-77))---------------------------------------------------------------------------------------------------------------GSSAGALLAHAASLGVR--------LWVEGERLRFQA-----P----------PGVMTPELQSRLGGARHELIALLRQLQPSSQGGSLLAPVARNGR-----------


General information:
TITO was launched using:
RESULT:

Template: 2JUG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 158 -16770 -106.14 -229.73
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.52

3D Compatibility (PKB) : -106.14
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.52
QMean score : 0.338

(partial model without unconserved sides chains):
PDB file : Tito_2JUG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JUG-query.scw
PDB file : Tito_Scwrl_2JUG.pdb: