Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKRFSTAYLLLGILCSAAVFLIGAPSRALGAEVEHYEPLQVHVQLEKVYLDGDVSIEHKHEKVFSMDDFWAAYAGWTLVEQKKGYVLFR--KQMDDISPLSKVNGYIGVSDNGVISTFHGRPEPASEPIQSFFQIDLERLESHMQKNLLKGIPFRTKAEFEDVIEHMKTYSG
1CM8 Chain:A ((208-290))-------------------------------------------------------------------DIWSV--GCIMAEMITGKTLFKGSDHLDQLKEIMKVTG-----------------TPPAEFVQ--------RLQSDEAKNYMKGLPELEKKDFASILTN------


General information:
TITO was launched using:
RESULT:

Template: 1CM8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 162 11909 73.51 170.13
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : 73.51
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.351

(partial model without unconserved sides chains):
PDB file : Tito_1CM8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1CM8-query.scw
PDB file : Tito_Scwrl_1CM8.pdb: