Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIIMKEAIIATHNPGKVKEFKEILEPRGYDVKSLAEIGFTEEIEETGHTFEENAIMKAEAVAKAVNKMVIADDSGLSIDNLGGRPGVYSARYAGEQKDDQANIEKVLSELKGIEKEQRTARFRCALAVSIPGEETK--TVEGHVEGYIAEEPRGEYGFGYDPIFIVKDKDKTMAELTSDEKNKISHRADALKKLSKLLEA
1K7K Chain:A ((2-190))----QKVVLATGNVGKVRELASLLSDFGLDIVAQTDLG-VDSAEETGLTFIENAILKARHAAKVTALPAIADDSGLAVDVLGGAPGIYSARYSGEDATDQKNLQKLLETMKDVPDDQRQARFHCVLVYLRHAEDPTPLVCHGSWPGVITREPAGTGGFGYDPIFFVPSEGKTAAELTREEKSAISHRGQALKLL------


General information:
TITO was launched using:
RESULT:

Template: 1K7K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 964 -32879 -34.11 -175.82
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -34.11
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.505

(partial model without unconserved sides chains):
PDB file : Tito_1K7K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1K7K-query.scw
PDB file : Tito_Scwrl_1K7K.pdb: