Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYLLENHHIKMLVIACNTATAIALDDIQRSVGIPVVGVIQPGARAAIKVTDNQHIGVIGTENTIKSNAYEEALLALNPDLKVENLACPLLVPFVESGKFLDKTADEIVKTSLYPLKDTSIDSLILGCTHYPILKEAIQRYMGEHVNIISSGDETAREVSTILSYKGLLNQSPIAPDH-----QFLTTGARDQFAKIADDWFGHEVGHVECISLQEPIKR
2JFU Chain:A ((26-281))---RPIGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQVIQYTWEMTDYLVE-QGIKMLVIACNTATAVALEEIKAALSIPVIGVILPGTRAAVKKTQNKQVGIIGTIGTVKSQAYEKALKEKVPELTVTSLACPKFVSVVESNEYHSSVAKKIVAETLAPLTTKKIDTLILGCTHYPLLRPIIQNVMGENVQLIDSGAETVGEVSMLLDYFNLSN----SPQNGRTLCQFYTTGSAKLFEEIAEDWLG--IGHL-----------


General information:
TITO was launched using:
RESULT:

Template: 2JFU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1416 -191704 -135.38 -763.76
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.86

3D Compatibility (PKB) : -135.38
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.86
QMean score : 0.558

(partial model without unconserved sides chains):
PDB file : Tito_2JFU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JFU-query.scw
PDB file : Tito_Scwrl_2JFU.pdb: