Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYFVDRSKIEKTLGFFEHQLALFDSQTDWQSEIGELA----LQRIGHLLIECILDTGNDMIDGFIM--RDPGSY--DDIMDILVDEKVVTEKEGDELKKLIAYRKTLVQQYLLADSGELYRLIKAHQTALQDFPKRIRSYLETELGPVSAFK
2G9B Chain:A ((151-249))-------------------LKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEKNKQELDINNISTYKKNIMA---LSDGGKLYR-------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2G9B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 264 14199 53.78 156.03
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : 53.78
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.163

(partial model without unconserved sides chains):
PDB file : Tito_2G9B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2G9B-query.scw
PDB file : Tito_Scwrl_2G9B.pdb: