Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNQQNQKISNPQTPVPTTSEMNDRDFVNELLTTEKYMTTAYCTALHEFSHESLYQDIQSIFDESQKAQRKLYDLMFQYGWYSVEAEDSQKLQQSYQKFQQTIQQQSPYQQ
2GYQ Chain:A ((19-84))------------------------HGLRDIYYAEQQITKALPKMIEQATNRDLSQGLTSHLEETQKQIERLDQVFKKLGQKPS---------------------------


General information:
TITO was launched using:
RESULT:

Template: 2GYQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 114 -14739 -129.29 -249.81
target 2D structure prediction score : 0.85
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -129.29
2D Compatibility (Sec. Struct. Predict.) : 0.85
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.623

(partial model without unconserved sides chains):
PDB file : Tito_2GYQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GYQ-query.scw
PDB file : Tito_Scwrl_2GYQ.pdb: