Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIVYAVNMGIVFIWSWFAKMCGGRDDSLATGYRPNKLLIWIPLASLVLVSGLRYRVGTDFQTYTLLYELAGDYQNVWQIFGFGTAKTATDPGFTALLWLMNFI-TEDP-QIMY---FTVAVVTYSFIMKTLADYGRP--FELSVFLFLGTF-HYYASF-NGI-RQYMVAAVLFWAIRYIIS---G-N---WKRYFLIVLVSSLFHSSALIMIPVYFIVRRKAWSPAIFGLSALFLGMTFLYQKFISVFVVVLENSSYSHYEKWLMTNTNGMNVIKIAVLVLPLFLAFCYKERLRSLWPQIDIVVNLCLLGFLFGLLATKDVIFARFNIYFGLYQMILVPYFVRIFDEKSNALIYIAIVVCYFLYSYLLMPVDSSVLPYRTIFSR
3RCE Chain:A ((79-227))---------------------------------------------------------------------------------------YFGSSLSTLTYWLYSILPFSFESIILYMSTFFASLIVVPIILIAREYKLTTYGFIAALLGSIANSYYNRTMSGYYDTDMLVLVLPMLILLTFIRLTINKDIFTLLLSPIFIMIYLWWYPSSY-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3RCE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 292 -53998 -184.92 -514.26
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.43

3D Compatibility (PKB) : -184.92
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.43
QMean score : 0.346

(partial model without unconserved sides chains):
PDB file : Tito_3RCE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3RCE-query.scw
PDB file : Tito_Scwrl_3RCE.pdb: