Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MSAFTLYPAIDMRNGKCVRLVQGDYNKETIYGDSPYDMAELFEKEGAEWIHLVDLDGAKEGKRVNDRHVIEIAQKLNLKVEIGGGIRSENDVYEYLSAGVERVILGSSAVSNPPFVKKMLKQYGEKIAIGLDARNGFVSTEGWLETSTLKATELGKELANEGAEVFIFTDIATDGMLSGPNVKSTVELAKETGKSVIASGGVSSVADLEALARNEADGVSGAIIGKALYTNQFTLSEALERVKRK 2VEP Chain:A ((1-237)) MSKLELLPAVDVRDGQAVRLVHGESGTETSYG-SPLEAALAWQRSGAEWLHLVDLDAAF-GTGDNRALIAEVAQAMDIKVELSGGIRDDDTLAAALATGCTRVNLGTAALETPEWVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGG-DLYETLDRLNKEGCARYVVTDIAKDGTLQGPNLELLKNVCAATDRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVGKALYAKAFTLEEALE-----

General information: TITO was launched using: RESULT: Template: 2VEP.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1361 -108256 -79.54 -456.77 target 2D structure prediction score : 0.74 Monomeric hydrophicity matching model chain A : 0.84 3D Compatibility (PKB) : -79.54 2D Compatibility (Sec. Struct. Predict.) : 0.74 1D Compatibility (Hydrophobicity) : 0.84 QMean score : 0.671

(partial model without unconserved sides chains): PDB file : Tito_2VEP.pdb: (Unconserved sides chains are recalculated) : Sequence: align-2VEP-query.scw PDB file : Tito_Scwrl_2VEP.pdb: