Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLRTEKEKMAAGELYNSEDQQLLLERKHARQLIRQYNET-PEDDAVRTKLLKELLGSVGDQVTILPTFRCDYGYHIHIGDHTFVNFDCVILDVCEVRIGCHCLIAPGVHIYTAGHPLDPIERKSGKEFGKPVTIGDQVWIGGRAVINPGVTIGDNAVIASGSVVTKDVPANTVVGGNPARILKQL
1OCX Chain:A ((2-182))---TEKEKMIAGELYRSADETLSRDRLRARQLIHRYNHSLAEEHTLRQQILADLFGQV-TEAYIEPTFRCDYGYNIFLGNNFFANFDCVMLDVCPIRIGDNCMLAPGVHIYTATHPIDPVARNSGAELGKPVTIGNNVWIGGRAVINPGVTIGDNVVVASGAVVTKDVPDNVVVGGNPARIIKKL


General information:
TITO was launched using:
RESULT:

Template: 1OCX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 945 -58165 -61.55 -323.14
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.91

3D Compatibility (PKB) : -61.55
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.91
QMean score : 0.664

(partial model without unconserved sides chains):
PDB file : Tito_1OCX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1OCX-query.scw
PDB file : Tito_Scwrl_1OCX.pdb: