Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEQVETRLTPRERLTRGLAYSAVGPVDVTRGLLELGVGLGLQSARSTAAGLRRRYREGRLAREVAAAQETLAQELTAAQDVVAN----LPQALQDARTQRRSKHHLWIFAGIAAAILAGGAVAFSIVRRSSRPEPSPRPPSVEVQPRS
5ED9 Chain:A ((17-66))
----------------------------------------------------------GRLEAQLASLRQELA-ALTLKQNSVADEVGLLPQKIQAARADVESQFPDWI----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
5ED9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2949 for 164 contacts (18.0/contact) +
2D Compatibility (PS) -5377 + (NN) -4320 + (LL) 6256
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: -4292.0 ( -26.17 by residue)
QMean score : 0.597
(partial model without unconserved sides chains):
PDB file :
Tito_5ED9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5ED9-query.scw
PDB file :
Tito_Scwrl_5ED9.pdb
: