Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPKSKVRKKNDFTVSAVSRTPMKVKVGPSSVWFVSLFIGLMLIGLIWLMVFQLAAIGSQAPTALNWMAQLGPWNYAIAFAFMITGLLLTMRWH
1FC0 Chain:A ((535-567))
---AKVKQENKLKFSQFLETEYKVKINPSSMFDVQV---------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1FC0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5934 for 133 contacts (44.6/contact) +
2D Compatibility (PS) -3459 + (NN) -193 + (LL) 6076
1D Compatibility (HY) -4000 + (ID) 600
Total energy: 3758.0 ( 28.26 by residue)
QMean score : -0.009
(partial model without unconserved sides chains):
PDB file :
Tito_1FC0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FC0-query.scw
PDB file :
Tito_Scwrl_1FC0.pdb
: