Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRILVVDNYDSFVFNLVQYLGQLGIEAEVWRND-DHRLSDEAAVAGQFDGVLLSPGPGTPERAGASVSIVHACAAAHTPLLGVCLGHQAIGVAFGATVDRAPELLHGKTSSVFHTNVGVLQGLPDPFTATRYHSLTILPKSLPAVLRVTARTSSGVIMAVQHTGLPIHGVQFHPESILTEGGHRILANWLTCCGWTQDDTLVRRLENEVLTAISPHFPTSTASAGEATGRTSA
1I7S Chain:B ((4-187))
--ILLLDNVDSFTYNLVDQLRASGHQVVIYRNQIGAEVIIERLQHMEQPVLMLSPGPGTPSEAGCMPELLQRLRG-QLPIIGICLGHQAIVEAYGGQVGQAGEILHGKASAIAHDGEGMFAGMANPLPVARYHSL--VGSNIPADLTVNARFGE-MVMAVRDDRRRVCGFQFHPESILTTHGARLLEQTL-------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1I7S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -132208 for 1527 contacts (-86.6/contact) +
2D Compatibility (PS) -18815 + (NN) 617 + (LL) 2824
1D Compatibility (HY) -15600 + (ID) 3800
Total energy: -166982.0 ( -109.35 by residue)
QMean score : 0.412
(partial model without unconserved sides chains):
PDB file :
Tito_1I7S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I7S-query.scw
PDB file :
Tito_Scwrl_1I7S.pdb
: