Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNYSEVELLSRAHQLFAGDSRRPGLDAGTTPYGDLLSRAADLNVGAGQRRYQLAVDHSRAALLSAARTDAAAGAVITGAQRDRAWARRSTGTVLDEARSDTTVTAVMPIAQREAIRRRVARLRAQRAHVL-TARRRARRHLAALRALRYRVAHGPGVALAKLRLPSPSGR--AGIAVHAALSRLGRPYVWG---ATGPNQ----------FDCSGLVQWAYAQAGVHLDRTTYQQINEGIPVPRSQVRPGDLVFPHPG---HVQLAIGNNLVVEAPHAGASVRVSSLGNNVQIRRPLSGR |
4Q4T Chain:A ((285-457)) | -----------------------------------------------------------------------------------------------------------------AVVNQVLGISATSAQVTANMGRKFLEQLGILQPTDTGITNAP-AGSAQGRIPRVYGRQASEYVIRRGMSQIGVPYSWGGGNAAGPSKGIDSGAGTVGFDCSGLVLYSFAGVGIKLPHYSGSQYNLGRKIPSSQMRRGDVIFYGPNGSQHVTIYLGNGQMLAAPDVGLKVRVAPV------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q4T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62033 for 1085 contacts (-57.2/contact) +
2D Compatibility (PS) -16302 + (NN) -7702 + (LL) 7776
1D Compatibility (HY) -10400 + (ID) 2700
Total energy: -91361.0 ( -84.20 by residue)
QMean score : 0.382
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