Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEQAGSSVAVIQERQALLARQHDAVAEADRELADVLASAHAAMRESVRRLDAIAAELDRAVPDQDQLAVDTPMGAREFQTFLVAKQREIVAVVAAAHELDRAKSAVLKRLRAQYTEPAR
2CTK Chain:A ((58-83))
--------------------------------------------------------------------------------------QSDIIAITGLAANLDRAKAGLLERVK--------
General information:
TITO was launched using:
RESULT:
Template:
2CTK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2802 for 102 contacts (-27.5/contact) +
2D Compatibility (PS) -2977 + (NN) -2490 + (LL) 8844
1D Compatibility (HY) -2400 + (ID) 550
Total energy: -2375.0 ( -23.28 by residue)
QMean score : 0.383
(partial model without unconserved sides chains):
PDB file :
Tito_2CTK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CTK-query.scw
PDB file :
Tito_Scwrl_2CTK.pdb
: