Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRPYEIMVILDPTLDERTVAPSLETFLNVVRKDGGKVEKVDIWGKRRLAYEIAKHAEGIYVVIDVKAAPATVSELDRQLSLNESVLRTKVMRTDKH
1CQN Chain:A ((1-95))
MRRYEVNIVLNPNLDQSQLALEKEIIQRALENYGARVEKVAILGLRRLAYPIAKDPQGYFLWYQVEMPEDRVNDLARELRIRDNVRRVMVVKSQE-
General information:
TITO was launched using:
RESULT:
Template:
1CQN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69761 for 656 contacts (-106.3/contact) +
2D Compatibility (PS) -10094 + (NN) -1173 + (LL) 44
1D Compatibility (HY) -10000 + (ID) 1700
Total energy: -92684.0 ( -141.29 by residue)
QMean score : 0.592
(partial model without unconserved sides chains):
PDB file :
Tito_1CQN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CQN-query.scw
PDB file :
Tito_Scwrl_1CQN.pdb
: