Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAGDTTITIVGNLTADPELRFTPSGAAVANFTVASTPRIYDRQTGEWKDGEALFLRCNIWREAAENVAESLTRGARVIVSGRLKQRSFETREGEKRTVIEVEVDEIGPSLRYATAKVNKASRSGGFGSGSRPAPAQTSSASGDDPWGSAPASGSFGGGDDEPPF
1UE6 Chain:A ((2-123))
-AGDTTITIVGNLTADPELRFTPSGAAVANFTVASTPRIYDRQ---WKDGEALFLRCNIWREAAENVAESLTRGARVIVSGRLKQRS---------TVIEVEVDEIGPSLRYATAKVNKASRS-----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1UE6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53286 for 682 contacts (-78.1/contact) +
2D Compatibility (PS) -11825 + (NN) -4066 + (LL) -660
1D Compatibility (HY) -12800 + (ID) 5350
Total energy: -87987.0 ( -129.01 by residue)
QMean score : 0.481
(partial model without unconserved sides chains):
PDB file :
Tito_1UE6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UE6-query.scw
PDB file :
Tito_Scwrl_1UE6.pdb
: