Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKANTPGAVTWLDTPKRFLSTQTASRCMAVNSSDVVTGRIDPQVLHTPLNTDVDGYAHAMHSSINSGPLEYLPATFSVFPALGDVGDLGGGVGAATYALDRLSNMRSGACVGGGESPWRSLMT |
4J8C Chain:A ((19-29)) | ----------------------------------------------------------------------------------------RQDPSVLHTEE-------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J8C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -818 for 30 contacts (-27.3/contact) +
2D Compatibility (PS) -1088 + (NN) -1175 + (LL) 7488
1D Compatibility (HY) 0 + (ID) 350
Total energy: 4057.0 ( 135.23 by residue)
QMean score : -0.198
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