Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAPTDRRVRADAARNRARVLEVAYQTFAADGLSVPVDEIARRAGVGAGTVYRHFPTKEALFQAVIADRMHRIIDKGHALLKSKHPGDALFAFLRSMVLQWGATDRGLVEALAGVGIEISSAAPEAEADFLDLLTDLLRAAQRAGTVRPDVDVLEVKTLLVGCQAMQSYNAE--LAAKVTDVALDGLRANRK
2Q24 Chain:A ((16-187))
--------------NRDKILAAAVRVFSEEGLDAHLERIAREAGVGSGTLYRNFPTREALIEAAYRNEVARLCDSVPGLLAELPPAEALRAWTRRFI-DYATAKLGMADALRAVVASGGDPYGDSRQLIQSALTALMDAAAAAGEIRSDIRSTDMFAALAGIALTSSRPDQRAQAERLLDLVLDGLR----
General information:
TITO was launched using:
RESULT:
Template:
2Q24.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111724 for 1297 contacts (-86.1/contact) +
2D Compatibility (PS) -18804 + (NN) -15487 + (LL) 1540
1D Compatibility (HY) -9200 + (ID) 2850
Total energy: -156525.0 ( -120.68 by residue)
QMean score : 0.611
(partial model without unconserved sides chains):
PDB file :
Tito_2Q24.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q24-query.scw
PDB file :
Tito_Scwrl_2Q24.pdb
: