Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLFAALRDMQWRKRRLVITIISTGLIFGMTLVLTGLANGFRVEARHTVDSMGVDVFVVRSGAAGPFLGSIPFPDVDLARVAAEPGVMAAAPLGSVGTIMKEGTSTRNVTVFGAPEHGPGMPRVSEGRSPSKPDEVAASSTMGRHLGDTVEVGARRLRVVGIVPNSTALAKIPNVFLTTEGLQKLAYNGQPNITSIGIIGMPRQLPEGYQTFDRVGAVNDLVRPLKVAVNSISIVAVLLWIVAVLIVGSVVYLSALERLRDFAVFKAIGTPTRSIMAGLALQALV--IALLAAVVGVVLAQVLAPLFPMIVAVPVGAYL-----ALPVAAIVIGLFASVAGLKRVVTVDPAQAFGGP |
4Z3P Chain:A ((324-393)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GNVTRTLNAYWAAVALAFSIVLVLAVMHIVLAPWMYPLFTRVVAVSDYAVLQTRIMALALPFVAISLLAS------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Z3P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40498 for 318 contacts (-127.4/contact) +
2D Compatibility (PS) -6688 + (NN) -4308 + (LL) 19508
1D Compatibility (HY) -8000 + (ID) 1400
Total energy: -41386.0 ( -130.14 by residue)
QMean score : 0.095
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