Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPAVTTPSNHWGDERRK----------LSHQPPVRGQILGRRQARRLSQHFARVGVEAPPKRLQEMLLGAPAADEEWTDVKFALIVTQLNHEKRVAKFHRLQRRATHSLICLGLVLVALNFLICLAYIFFSLTQHAAAL
2JI6 Chain:A ((295-348))
----------WGDELKKYVQIDIQANEMDSNQPIAAPVVG--------------DIKSAVSLLRKALKGAPKADAEWT-------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2JI6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2636 for 158 contacts (-16.7/contact) +
2D Compatibility (PS) -4642 + (NN) -3412 + (LL) 8676
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -5664.0 ( -35.85 by residue)
QMean score : 0.400
(partial model without unconserved sides chains):
PDB file :
Tito_2JI6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JI6-query.scw
PDB file :
Tito_Scwrl_2JI6.pdb
: