Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTIDISAGTIHYEATGPETGRPVVFVHGYMMGGQLWRRVSERLAGRGLRCIAPTWPLGAHPKPLRPGADQTIGGVAGIVADVLAALELKDVVLVGNDTGGVVTQLVAVHYPERLGALVLTSCDAF-EHFP-----PPILKPVILAAKSATLFRAAIQVMRA---PAARNRAYAGLSHHNIDHLTRAWVRPALSNPAIAEDLRQLSLSLR----TEVTTAVAARLPEFDKPALIAWSADDVFFALENGQRLAATIPRARFEVIEGARTFSMVDSPDRLADQLSTVAVRT |
| 3RK4 Chain:A ((15-287)) | ---VEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAPSH-RCIAPD--LIGMGKSDKPDLDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGI---ACMEFIRPFPTWDEWPEFARETFQAFRTADVGRELIIDQNAFIEGALPKYVVRPLTEVEMDHYREPFLKPVDREP-LWRFPNELPIAGEPANIVALVEAYMNWLHQSPVPKLLFWGTPGFIIPPAEAARLAESLPNCKTVDIGPGLHFLQEDNPDLIGSEIA------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RK4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162296 for 2181 contacts (-74.4/contact) +
2D Compatibility (PS) -26711 + (NN) -4560 + (LL) 1720
1D Compatibility (HY) -14800 + (ID) 3350
Total energy: -209997.0 ( -96.28 by residue)
QMean score : 0.435
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