Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEPKRSRLVVCAPEPSHAREFPDVAVFSGGRANASQ-------AERLARAVGRVLADR-----GVTGGARVR-LTMANCADGPTLVQINLQVGDTPLRAQAATAGIDDLRPALIRLDRQIVRASAQ-WCPRPWPDRPRRRLTTPAEALVTRRKPVVLRRATPLQAIAAMDAMDYDVHLFTDAETGEDAVVYRAGPSGLRLARQHHVFPPGWSRCRAPAGPPVPLIVNSRPTPVLTEAAAVDRAREHGLPFLFFTDQATGRGQLLYSRYDGNLGLITPTGDGVADGLA |
| 3UK2 Chain:A ((142-282)) | ---------------------PRVAVF--GKKDYQQLMIVRRMCQQLALPVEIVAAETVRDADGLALSSRNRYLSEAERAEAPELAKTLARVRDAVLDGERDLAAIER---------RAVAHLSARGWQPDYVSIRRRENLVAPSAAQIEAGDPLVVLTAAKLGATRLIDNLE------------------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3UK2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -2304 for 831 contacts (-2.8/contact) +
2D Compatibility (PS) -13309 + (NN) -1520 + (LL) 7220
1D Compatibility (HY) -4800 + (ID) 2050
Total energy: -16763.0 ( -20.17 by residue)
QMean score : 0.078
|
|
|