Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKNQNRIRNRWELITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQGRGAPEDAPLIMRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDRDLPVLR-AAGFKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWGEYFAVVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVERRGEQLLDLERAAMLT |
3JCM Chain:G ((316-452)) | --------------------------------------------------------------------------------------------------LESTTVNKYRVVRKALQE-IPRDEGLWKLAVSFEADKAQVIKMLEKATQFIPQSMDLLT----AYTNLQS----------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JCM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1996 for 425 contacts (-4.7/contact) +
2D Compatibility (PS) -6486 + (NN) -435 + (LL) 15500
1D Compatibility (HY) -3600 + (ID) 1200
Total energy: 1783.0 ( 4.20 by residue)
QMean score : 0.034
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