Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRYLPVSTRRIWVNPLCHFSFTVISGALFVSARRYDSNMLANSREELVEVFDALDADLDRLDEVSFEVLSTP--ERLRSLERLECLARRLPAAQHTLINQLDTQASEEELGGTLCCALANRLRITKPEAGRRSAEAKP
2Q2U Chain:A ((29-94))
-----------------------------------------------------LAATLENIEDVQFPCLATPKIDGIRSVKQTQMLSRTFKPIRNSVMNRLLTELLPEGSDGEISIEGA-------------------
General information:
TITO was launched using:
RESULT:
Template:
2Q2U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6558 for 294 contacts (-22.3/contact) +
2D Compatibility (PS) -6204 + (NN) 2721 + (LL) 5444
1D Compatibility (HY) -5200 + (ID) 900
Total energy: -10697.0 ( -36.38 by residue)
QMean score : 0.071
(partial model without unconserved sides chains):
PDB file :
Tito_2Q2U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q2U-query.scw
PDB file :
Tito_Scwrl_2Q2U.pdb
: