Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLKVKGEGLGAQVTGVD-PKNLDDITTDEIRDIVYTNKLVVLKDVHPSPREFIKLGRIIGQIVPYYEPMYHH-EDHPEIFVSSTEEGQGVPKTGAFWHIDYMFMPEPFAFSMVLPLAVPGHDRGTYFIDLARVWQSLPAAKRDPARGTVSTHD-----PRRHIKIRPSDVYRPIGEVWDEINRTTPPIKWPTVIRHPKTGQEILYICATGTTKIEDKDGNPVDPEVLQELMAATGQLDPEYQSPFIHTQHYQVGDIILWDNRVLMHRAKHGSAAGTLTTYRLTMLDGLKTPGYAA |
| 3V17 Chain:A ((3-272)) | LTITPLSPALGAQISGVDISRDISAEERDAIEQALLQHQVLFLRDQPINPEQQARFAARFGDL--HIHPIYPNVPDTPQVLVLDTAVTDV--RDNAVWHTDVTFLPTPALGAVLSAKQLPAYGGDTLWASGIAAFEALSAPLREMLDGLTATHDFTKSFPLERFGTTPQDLAR-----WEATRRNNPPLSHPVVRTHPVSGRKALFVNEGFTTRINEL--SELESDALLRLLFAHAT-RPEFSIRW----RWQENDVAFWDNRVTQHFAVDDYRPNRRVMHRATIL---------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3V17.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -116581 for 2061 contacts (-56.6/contact) +
2D Compatibility (PS) -28122 + (NN) -6858 + (LL) 752
1D Compatibility (HY) -9200 + (ID) 3500
Total energy: -163509.0 ( -79.33 by residue)
QMean score : 0.463
|
|
|