Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAGSVSAAAGIGWVGLNVTETNRDQCYRVERTTVDALTHPEYRVHTRGV-QRVRVTRNARKHRVSKHRIVAAMRHCGVPVIQEDGSLYYQGRDTSGRLTEVVAVEADDGDLIITHAMPKEWKR |
1E41 Chain:A ((119-189)) | --------------------------LKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLVGALRSCQMNLVADLVQEVQQARDLQNR-------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1E41.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 326 for 399 contacts (0.8/contact) +
2D Compatibility (PS) -7102 + (NN) 1589 + (LL) 3680
1D Compatibility (HY) -4000 + (ID) 850
Total energy: -6357.0 ( -15.93 by residue)
QMean score : 0.154
|
|
|