Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNSRRRSLRWSWLLSVLAAVGLGLATAPAQAAPPALSQDRFADFPALPLDPSAMVAQVGPQVVNINTKLGYNNAVGAGTGIVIDPN-GVVLTNNHVIAGATDINAFSVGSGQTYGVDVVGYDRTQDVAVLQLRGAGGLPSAAIGGG--VAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQTVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQ---GFAIPIGQAMAIAGQIRSGG-------GSPTVHIGPTAFLGLGVVDNNGNGARVQRVVGSAPAASLGISTGDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGPPA |
| 3PV2 Chain:A ((67-326)) | ------------------------------------------------------------------------------GSGVIIDPNNGVIITNDHVIRNASLI-TVTLQDGRRLKARLIGGDSETDLAVLKI-DAKNLKSLVIGDSDKLEVGDFVVAIGNPFGL--SQSATFGIVSAL----K-------------NFIQTDAAINPGNSGGALVNAKGELIGINTAIL----------VGIGFAIPINMVKDVAQQIIKFGSIHRGLMGIFVQHLTPELAQAMGYPE-DFQGALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQVKTTISLLRVGSTVKIIVE------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PV2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138399 for 1760 contacts (-78.6/contact) +
2D Compatibility (PS) -24955 + (NN) -11683 + (LL) 5444
1D Compatibility (HY) -16400 + (ID) 4350
Total energy: -190343.0 ( -108.15 by residue)
QMean score : 0.379
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