Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRSDTLATKLPWSDWLSRQRWYAGRNRELATVKPGVVVALRHNLDLVLVDVTYTDGATERYQVLVGWDFEPASEYGTKAAIGVA----DDRTGFDALYDVAGPQFLLSLIVSSAVCGTSTGEVTFTREPDVELPFAAQPRVCDAEQSNTSVIFDRRAILKVFRRVSSGINPDIELNRVLTRAGNPHVARLLGAYQ--FGRPNRSPTDALAYALGMVTEYEANAAEGWAMATASVRDLFAEGDLYAHEVGGDFAGESYRLGEAVASVHATLADSLGTAQATFPVDRMLARLSSTVAVVPELREYAPTIEQQFQKLAAEAITVQRVHGDLHLGQVLRTPESWLLIDFEGEPGQPLDERRAPDSPLRDVAGVLRSFEYAAYGPLV----DQATDKQLAARAREWVERNRAAFCDGYAVASGIDPRDSALLLGAYELDKAVYETGYETRHRPGWLPIPLRSIARLTAS |
| 4U94 Chain:A ((3-439)) | ----------LAFGDWIVHRRWYAGRSRELVSAEPAVVTPLRDDLDHILLDVTYTDGTVERYQLVVRWADSPVAGFGEAATIGTALGPQGERIAYDALFDPDAARHLLRLVDASA----TVADLRFTREPGATLPLYAPPKVSSAEQSNTSVIFGKDAMLKVFRRVTPGINPDIELNRVLAQAGNRHVARLLGSFETSWAGPG---TDRCA--LGMVTAFAANSAEGWDMATASAREMFAD------VVGSDFADESYRLGNAVASVHATLAEALGTSTEPFPVDTVLARLQSAARSAPELAGRAAAVEERYRRLDGRAITVQRVHGDLHLGQVLRTPDDWLLIDFEGEPGQPLDERRRPDSPLRDVAGVLRSFEYAAYQKLVELAPEQDADGRLADRARNWVDRNSAAFCAGYAAVAGDDPRRDGDVLAAYELDKAVYEAAYEARFRPSWLPIPMRSIDRI--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U94.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -209486 for 3513 contacts (-59.6/contact) +
2D Compatibility (PS) -45875 + (NN) -15943 + (LL) 1416
1D Compatibility (HY) -40800 + (ID) 13400
Total energy: -324088.0 ( -92.25 by residue)
QMean score : 0.485
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